Sequence Similarity Clusters for the Entities in PDB 4AYI

Entity #1 | Chains: A,E
COMPLEMENT FACTOR H protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 2497
95 % 1 6 3132
90 % 1 6 3178
70 % 1 6 3150
50 % 2 7 2947
40 % 3 8 2627
30 % 3 8 2458
Entity #2 | Chains: D
LIPOPROTEIN GNA1870 CCOMPND 7 protein, length: 270 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54127
95 % 1 2 21138
90 % 1 2 20554
70 % 6 14 2085
50 % 6 14 2069
40 % 6 14 2071
30 % 6 14 1981

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.