Sequence Similarity Clusters for the Entities in PDB 4AYI

Entity #1 | Chains: A,E
COMPLEMENT FACTOR H protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 2236
95 % 1 6 2843
90 % 1 6 2886
70 % 1 6 2882
50 % 2 7 2707
40 % 3 8 2412
30 % 3 8 2260
Entity #2 | Chains: D
LIPOPROTEIN GNA1870 CCOMPND 7 protein, length: 270 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 50056
95 % 1 2 19538
90 % 1 2 18998
70 % 6 13 1942
50 % 6 13 1964
40 % 6 13 1973
30 % 6 13 1886

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.