Sequence Similarity Clusters for the Entities in PDB 4AYE

Entity #1 | Chains: A,B,E
COMPLEMENT FACTOR H protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 2473
95 % 5 6 3105
90 % 5 6 3149
70 % 5 6 3121
50 % 6 7 2928
40 % 7 8 2602
30 % 7 8 2436
Entity #2 | Chains: C,D,F
FACTOR H BINDING PROTEIN protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 25273
95 % 6 8 3495
90 % 7 9 3110
70 % 10 14 2065
50 % 10 14 2055
40 % 10 14 2057
30 % 10 14 1972

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.