Sequence Similarity Clusters for the Entities in PDB 4AYE

Entity #1 | Chains: A,B,E
COMPLEMENT FACTOR H protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 2335
95 % 5 6 2956
90 % 5 6 2998
70 % 5 6 2989
50 % 6 7 2816
40 % 7 8 2498
30 % 7 8 2334
Entity #2 | Chains: C,D,F
FACTOR H BINDING PROTEIN protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 24284
95 % 6 7 3642
90 % 7 8 3180
70 % 10 13 2023
50 % 10 13 2040
40 % 10 13 2041
30 % 10 13 1952

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.