Sequence Similarity Clusters for the Entities in PDB 4AYE

Entity #1 | Chains: A,B,E
COMPLEMENT FACTOR H protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 2594
95 % 5 6 3230 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 5 6 3280
70 % 5 6 3248
50 % 6 7 3050
40 % 7 8 2713
30 % 7 8 2539
Entity #2 | Chains: C,D,F
FACTOR H BINDING PROTEIN protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 26248
95 % 6 8 3626 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 7 9 3239
70 % 10 14 2162
50 % 10 14 2143
40 % 10 14 2128
30 % 10 14 2043

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.