Sequence Similarity Clusters for the Entities in PDB 4AYE

Entity #1 | Chains: A,B,E
COMPLEMENT FACTOR H protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 2177
95 % 5 6 2773
90 % 5 6 2819
70 % 5 6 2817
50 % 6 7 2646
40 % 7 8 2357
30 % 7 8 2205
Entity #2 | Chains: C,D,F
FACTOR H BINDING PROTEIN protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 22866
95 % 6 7 3437
90 % 7 8 2994
70 % 10 13 1906
50 % 10 13 1931
40 % 10 13 1941
30 % 10 13 1849

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.