Sequence Similarity Clusters for the Entities in PDB 4AYD

Entity #1 | Chains: A,B,E
COMPLEMENT FACTOR H protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 2317
95 % 2 6 2930
90 % 2 6 2975
70 % 2 6 2965
50 % 3 7 2793
40 % 4 8 2477
30 % 4 8 2316
Entity #2 | Chains: C,D,F
FACTOR H BINDING PROTEIN protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 24093
95 % 3 7 3615
90 % 4 8 3156
70 % 7 13 2011
50 % 7 13 2024
40 % 7 13 2025
30 % 7 13 1939

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.