Sequence Similarity Clusters for the Entities in PDB 4AYD

Entity #1 | Chains: A,B,E
COMPLEMENT FACTOR H protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 2516
95 % 2 6 3153
90 % 2 6 3201
70 % 2 6 3172
50 % 3 7 2972
40 % 4 8 2654
30 % 4 8 2480
Entity #2 | Chains: C,D,F
FACTOR H BINDING PROTEIN protein, length: 257 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 25590
95 % 3 8 3541
90 % 4 9 3158
70 % 7 14 2098
50 % 7 14 2085
40 % 7 14 2088
30 % 7 14 1995

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.