Sequence Similarity Clusters for the Entities in PDB 4AWL

Entity #1 | Chains: A
NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT ALPHA protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64054
95 % 1 1 44400
90 % 1 1 42294
70 % 1 1 37387
50 % 1 1 32066
40 % 1 1 28300
30 % 1 1 23873
Entity #2 | Chains: B
NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT BETA protein, length: 94 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26100
95 % 3 3 21656
90 % 3 3 20985
70 % 5 5 12204
50 % 5 5 10928
40 % 5 5 9944
30 % 5 5 8666
Entity #3 | Chains: C
NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA protein, length: 94 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26052
95 % 3 3 21616
90 % 3 3 20944
70 % 3 3 19176
50 % 3 3 16706
40 % 3 3 14922
30 % 3 3 12795
Entity #4 | Chains: I
HSP70 PROMOTER FRAGMENT dna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #5 | Chains: J
HSP70 PROMOTER FRAGMENT dna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.