Sequence Similarity Clusters for the Entities in PDB 4AWL

Entity #1 | Chains: A
NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT ALPHA protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64567
95 % 1 1 44761
90 % 1 1 42634
70 % 1 1 37671
50 % 1 1 32295
40 % 1 1 28490
30 % 1 1 24026
Entity #2 | Chains: B
NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT BETA protein, length: 94 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26333
95 % 3 3 21826
90 % 3 3 21146
70 % 5 5 12321
50 % 5 5 11024
40 % 5 5 10026
30 % 5 5 8725
Entity #3 | Chains: C
NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA protein, length: 94 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26285
95 % 3 3 21785
90 % 3 3 21104
70 % 3 3 19322
50 % 3 3 16829
40 % 3 3 15017
30 % 3 3 12863
Entity #4 | Chains: I
HSP70 PROMOTER FRAGMENT dna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #5 | Chains: J
HSP70 PROMOTER FRAGMENT dna, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.