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The NF-Y transcription factor is structurally and functionally a sequence specific histone
Sequence Clustering and Redundancy Reduction Results
4AWL
Sequence Clusters for the Sequence Entities in PDB 4AWL
Entity #1: Chains: A - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT ALPHA protein, length: 78 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 57673
95% 1 1 40159
90% 1 1 38386
70% 1 1 34144
50% 1 1 29399
40% 1 1 26006
30% 1 1 21989
Entity #2: Chains: B - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT BETA protein, length: 94 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 23094
95% 3 3 19259
90% 3 3 18695
70% 5 5 10907
50% 5 5 9798
40% 5 5 8940
30% 5 5 7833
Entity #3: Chains: C - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA protein, length: 94 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 23053
95% 3 3 19225
90% 3 3 18660
70% 3 3 17186
50% 3 3 15063
40% 3 3 13497
30% 3 3 11607
Entity #4: Chains: I - HSP70 PROMOTER FRAGMENT dna, length: 25 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #5: Chains: J - HSP70 PROMOTER FRAGMENT dna, length: 25 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.