Sequence Similarity Clusters for the Entities in PDB 4AWJ

Entity #1 | Chains: A,D,G,J
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 17 322
95 % 13 17 475
90 % 13 17 504
70 % 13 17 550
50 % 13 17 636
40 % 13 17 677
30 % 13 17 675
Entity #2 | Chains: B,E,H,K
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 36 208
95 % 21 37 291
90 % 21 37 305
70 % 21 37 327
50 % 21 37 355
40 % 21 37 388
30 % 21 38 387
Entity #3 | Chains: C,F,I,L
VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 24 262
95 % 15 24 382
90 % 15 24 407
70 % 15 24 441
50 % 15 24 511
40 % 15 24 547
30 % 15 24 551

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.