Sequence Similarity Clusters for the Entities in PDB 4AWJ

Entity #1 | Chains: A,D,G,J
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 17 325
95 % 13 17 479
90 % 13 17 509
70 % 13 17 553
50 % 13 17 636
40 % 13 17 680
30 % 13 17 680
Entity #2 | Chains: B,E,H,K
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 36 208
95 % 21 37 295
90 % 21 37 310
70 % 21 37 331
50 % 21 37 361
40 % 21 37 395
30 % 21 38 393
Entity #3 | Chains: C,F,I,L
VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 24 263
95 % 15 24 384
90 % 15 24 408
70 % 15 24 442
50 % 15 24 513
40 % 15 24 549
30 % 15 24 553

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.