Sequence Similarity Clusters for the Entities in PDB 4AWJ

Entity #1 | Chains: A,D,G,J
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 17 315
95 % 13 17 466
90 % 13 17 494
70 % 13 17 539
50 % 13 17 626
40 % 13 17 669
30 % 13 17 662
Entity #2 | Chains: B,E,H,K
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 21 36 206
95 % 21 37 290
90 % 21 37 303
70 % 21 37 324
50 % 21 37 346
40 % 21 37 380
30 % 21 38 381
Entity #3 | Chains: C,F,I,L
VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 15 24 261
95 % 15 24 376
90 % 15 24 399
70 % 15 24 430
50 % 15 24 496
40 % 15 24 533
30 % 15 24 537

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.