Sequence Similarity Clusters for the Entities in PDB 4AWJ

Entity #1 | Chains: A,D,G,J
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 104 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 14 18 361
95 % 14 18 515
90 % 14 18 549
70 % 14 18 591
50 % 14 18 634
40 % 14 18 669
30 % 14 18 678
Entity #2 | Chains: B,E,H,K
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 22 37 211
95 % 22 38 297
90 % 22 38 311
70 % 22 38 350
50 % 22 38 407
40 % 22 38 443
30 % 22 39 436
Entity #3 | Chains: C,F,I,L
VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 25 261
95 % 16 25 381
90 % 16 25 410
70 % 16 25 454
50 % 16 25 527
40 % 16 25 568
30 % 16 25 564

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.