Sequence Similarity Clusters for the Entities in PDB 4AVY

Entity #1 | Chains: A,B
PROBABLE SHORT-CHAIN DEHYDROGENASE protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21405
95 % 1 2 18651 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 18257
70 % 1 2 16936
50 % 1 2 14726
40 % 121 289 14
30 % 395 897 4

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures