Sequence Similarity Clusters for the Entities in PDB 4AVY

Entity #1 | Chains: A,B
PROBABLE SHORT-CHAIN DEHYDROGENASE protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21875
95 % 1 2 18723 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 18215
70 % 1 2 19412
50 % 1 2 16775
40 % 162 352 11
30 % 414 941 4

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures