Sequence Similarity Clusters for the Entities in PDB 4AUP

Entity #1 | Chains: A,B
PHOSPHOLIPASE A2 GROUP XIII protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39141
95 % 1 1 33166 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 1 37703
70 % 1 1 33380
50 % 1 1 28341
40 % 1 1 24841
30 % 1 1 15495

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures