Sequence Similarity Clusters for the Entities in PDB 4AUI

Entity #1 | Chains: A,B,C
PORIN (PORB) protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 29730
95 % 1 1 25968 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 1 25043
70 % 2 3 13958
50 % 7 9 6146
40 % 7 9 5722
30 % 7 9 5016
Entity #2 | Chains: D,E,F
POLY ALA protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures