Sequence Similarity Clusters for the Entities in PDB 4AU3

Entity #1 | Chains: A,C,D
SERPIN PEPTIDASE INHIBITOR, CLADE H (HEAT SHOCK PROTEIN 47 ), MEMBER 1, (COLLAGEN BINDING PROTEIN 1) protein, length: 392 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 2145
95 % 3 5 2642 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 3 5 2688
70 % 3 5 2673
50 % 3 5 2641
40 % 3 5 2592
30 % 125 178 184
Entity #2 | Chains: B
SERPYIN PEPTIDASE INHIBITOR, CLADE H (HEAT SHOCK PROTEIN 47 ), MEMBER 1, (COLLAGEN BINDING PROTEIN 1) protein, length: 392 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53450
95 % 4 5 2642 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.7
PDBFlex
90 % 4 5 2688
70 % 4 5 2673
50 % 4 5 2641
40 % 4 5 2592
30 % 126 178 184
Entity #3 | Chains: E,F,G,H,I,J
18ER COLLAGEN MODEL PEPTIDE 15-R8 protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.