Sequence Similarity Clusters for the Entities in PDB 4ATZ

Entity #1 | Chains: A,B,C
FIBER PROTEIN protein, length: 201 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 29001
95 % 2 2 19403 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.2
PDBFlex
90 % 2 2 18889
70 % 2 2 17440
50 % 3 3 12255
40 % 14 22 984
30 % 19 37 442
Entity #2 | Chains: D,E,F
DESIGNED ANKYRIN REPEAT PROTEIN protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 29674
95 % 1 1 24598 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 1 23763
70 % 19 85 258
50 % 21 100 209
40 % 30 129 188
30 % 75 231 68

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures