Sequence Similarity Clusters for the Entities in PDB 4ATK

Entity #1 | Chains: A,B
MICROPHTHALMIA-ASSOCIATED TRANSCRIPTION FACTOR protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 22996
95 % 2 2 19662 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.0
PDBFlex
90 % 2 2 19124
70 % 2 2 17639
50 % 2 2 15336
40 % 2 2 13670
30 % 2 2 11695
Entity #2 | Chains: C,D
5'-D(*AP*GP*TP*AP*GP*CP*AP*CP*GP*TP*GP*CP*TP*AP*CP*T)-3' dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.