Sequence Similarity Clusters for the Entities in PDB 4ATK

Entity #1 | Chains: A,B
MICROPHTHALMIA-ASSOCIATED TRANSCRIPTION FACTOR protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 23945
95 % 2 2 20469 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 1.0
PDBFlex
90 % 2 2 19903
70 % 2 2 18303
50 % 2 2 15887
40 % 2 2 14149
30 % 2 2 12112
Entity #2 | Chains: C,D
5'-D(*AP*GP*TP*AP*GP*CP*AP*CP*GP*TP*GP*CP*TP*AP*CP*T)-3' dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures