Sequence Similarity Clusters for the Entities in PDB 4ATI

Entity #1 | Chains: A,B
MICROPHTHALMIA-ASSOCIATED TRANSCRIPTION FACTOR protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 19889
95 % 1 2 17137
90 % 1 2 16679
70 % 1 2 15428
50 % 1 2 13498
40 % 1 2 12079
30 % 1 2 10380
Entity #2 | Chains: C
5'-D(*GP*TP*TP*AP*GP*CP*AP*CP*AP*TP*GP*AP*CP*CP*CP*T)-3' dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: D
5'-D(*AP*GP*GP*GP*TP*CP*AP*TP*GP*TP*GP*CP*TP*AP*AP*C)-3' dna, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.