Sequence Similarity Clusters for the Entities in PDB 4AQP

Entity #1 | Chains: A,B,C,D
ATAXIN-1 protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 8349
95 % 2 6 3756 Flexibility: Low
Max RMSD: 5.0, Avg RMSD: 1.9
PDBFlex
90 % 2 6 3826
70 % 2 6 3754
50 % 2 6 3661
40 % 2 6 3489
30 % 3 8 2587

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1OA8 1 A, B, C, D ATAXIN-1 AXH DOMAIN, RESIDUES 562-694 9606
2 4AQP 1 A, B, C, D ATAXIN-1 AXH DOMAIN, RESIDUES 566-688 9606
3 4J2J 1 A, B, C Ataxin-1 AXH domain, UNP residues 562-688 9606
4 4APT 1 A, B, C, D ATAXIN-1 AXH DOMAIN, RESIDUES 566-688 9606
5 4J2L 1 A, B Ataxin-1 AXH domain, UNP residues 562-688 9606
6 2M41 2 B Ataxin-1 AXH domain, native residues A567-K689 9606