Sequence Similarity Clusters for the Entities in PDB 4APL

Entity #1 | Chains: A,B,D,E
APICAL MEMBRANE ANTIGEN 1 protein, length: 431 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 17233
95 % 1 1 15697 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 1 15390
70 % 7 7 2978
50 % 7 7 2935
40 % 8 9 1704
30 % 8 9 1665

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.