Sequence Similarity Clusters for the Entities in PDB 4APL

Entity #1 | Chains: A,B,D,E
APICAL MEMBRANE ANTIGEN 1 protein, length: 431 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 18112
95 % 1 1 16447 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 1 16134
70 % 7 7 3131
50 % 7 7 3070
40 % 8 9 1794
30 % 8 9 1749

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures