Sequence Similarity Clusters for the Entities in PDB 4AOR

Entity #1 | Chains: A,B,C
CATIONIC TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 246 412 39
95 % 272 471 18 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 272 471 20
70 % 299 557 19
50 % 316 708 14
40 % 588 1863 4
30 % 589 1885 6
Entity #2 | Chains: D,E,F
TRYPSIN INHIBITOR 3 protein, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31197
95 % 1 2 14030 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 2 13806
70 % 1 2 12956
50 % 1 2 11551
40 % 1 2 10467
30 % 1 2 9131

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures