Sequence Similarity Clusters for the Entities in PDB 4AOQ

Entity #1 | Chains: A,B,C
CATIONIC TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 332 384 40
95 % 375 443 33 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 375 443 34
70 % 419 527 19
50 % 469 678 14
40 % 947 1685 4
30 % 1011 1834 6
Entity #2 | Chains: D,E,F
TRYPSIN INHIBITOR 3 protein, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 29953
95 % 2 2 13433 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 2 2 13229
70 % 2 2 12448
50 % 2 2 11104
40 % 2 2 10081
30 % 2 2 8792

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.