Sequence Similarity Clusters for the Entities in PDB 4AOQ

Entity #1 | Chains: A,B,C
CATIONIC TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 338 389 34
95 % 381 448 33 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 381 448 34
70 % 425 532 19
50 % 475 683 14
40 % 952 1698 4
30 % 1016 1848 6
Entity #2 | Chains: D,E,F
TRYPSIN INHIBITOR 3 protein, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30279
95 % 2 2 13585 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 2 2 13373
70 % 2 2 12571
50 % 2 2 11211
40 % 2 2 10176
30 % 2 2 8879

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.