Sequence Similarity Clusters for the Entities in PDB 4AOQ

Entity #1 | Chains: A,B,C
CATIONIC TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 330 383 40
95 % 373 442 31 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.4
PDBFlex
90 % 373 442 33
70 % 417 526 18
50 % 467 677 14
40 % 943 1682 4
30 % 1007 1831 6
Entity #2 | Chains: D,E,F
TRYPSIN INHIBITOR 3 protein, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 29459
95 % 2 2 13243 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 2 2 13036
70 % 2 2 12231
50 % 2 2 10916
40 % 2 2 9913
30 % 2 2 8640

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.