Sequence Similarity Clusters for the Entities in PDB 4AMW

Entity #1 | Chains: A,B,C,D
ALPHA-1,4-GLUCAN LYASE ISOZYME 1 protein, length: 1027 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 3033
95 % 1 5 3362 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 5 3421
70 % 1 5 3354
50 % 1 5 3274
40 % 1 5 3162
30 % 1 5 2911

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures