Sequence Similarity Clusters for the Entities in PDB 4AMA

Entity #1 | Chains: A,B,C,D
N-ACETYLNEURAMINATE LYASE protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 19785
95 % 7 9 1420 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.6
PDBFlex
90 % 7 9 1444
70 % 7 9 1454
50 % 20 22 576
40 % 22 24 564
30 % 135 157 102

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures