Sequence Similarity Clusters for the Entities in PDB 4AMA

Entity #1 | Chains: A,B,C,D
N-ACETYLNEURAMINATE LYASE protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 20276
95 % 7 9 1462 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.6
PDBFlex
90 % 7 9 1485
70 % 7 9 1489
50 % 20 22 586
40 % 22 24 574
30 % 135 157 108

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures