Sequence Similarity Clusters for the Entities in PDB 4AMA

Entity #1 | Chains: A,B,C,D
N-ACETYLNEURAMINATE LYASE protein, length: 298 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 8 1466
95 % 7 9 1493 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.5
PDBFlex
90 % 7 9 1514
70 % 7 9 1532
50 % 20 22 615
40 % 22 24 595
30 % 145 167 108

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures