Sequence Similarity Clusters for the Entities in PDB 4AKJ

Entity #1 | Chains: A,C
INSULIN A CHAIN protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 133 243 5
95 % 156 285 7 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.9
PDBFlex
90 % 157 289 8
70 % 157 289 11
50 % 157 289 15
40 % 157 289 25
30 % 157 289 44
Entity #2 | Chains: B,D
INSULIN B CHAIN protein, length: 29 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 138 215 7
95 % 156 282 8 Flexibility: Medium
Max RMSD: 6.8, Avg RMSD: 3.5
PDBFlex
90 % 158 288 9
70 % 158 291 12
50 % 158 291 16
40 % 158 291 26
30 % 158 291 45

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures