Sequence Similarity Clusters for the Entities in PDB 4AKD

Entity #1 | Chains: A,B,C,D
MANNOSE-SPECIFIC LECTIN KM+ protein, length: 150 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22423
95 % 1 1 19353 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 4 9 1270
70 % 6 11 1086
50 % 34 49 258
40 % 34 49 275
30 % 62 91 196

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.