Sequence Similarity Clusters for the Entities in PDB 4AKC

Entity #1 | Chains: A,C,E,G
AGGLUTININ ALPHA CHAIN protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 7964
95 % 22 26 376
90 % 22 26 401
70 % 25 30 362
50 % 30 40 262
40 % 30 40 284
30 % 57 79 196
Entity #2 | Chains: B,D,F,H
AGGLUTININ BETA-4 CHAIN protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 2874
95 % 3 3 3593
90 % 10 14 760
70 % 10 14 803
50 % 10 14 878
40 % 10 14 903
30 % 10 14 895

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.