Sequence Similarity Clusters for the Entities in PDB 4AKC

Entity #1 | Chains: A,C,E,G
AGGLUTININ ALPHA CHAIN protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 8298
95 % 22 26 387
90 % 23 27 387
70 % 26 31 363
50 % 31 41 262
40 % 31 41 288
30 % 59 81 197
Entity #2 | Chains: B,D,F,H
AGGLUTININ BETA-4 CHAIN protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 3011
95 % 3 3 3740
90 % 10 14 829
70 % 10 14 868
50 % 10 14 913
40 % 10 14 939
30 % 10 14 932

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.