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An Information Portal to 107620 Biological Macromolecular Structures

Structure of Galactose Binding lectin from Champedak (CGB) with Gal(beta)1,3-GalNac
Sequence Clustering and Redundancy Reduction Results
4AKC
Sequence Clusters for the Sequence Entities in PDB 4AKC
Entity #1: Chains: A,C,E,G - AGGLUTININ ALPHA CHAIN protein, length: 133 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 7275
95% 22 26 345
90% 22 26 366
70% 25 30 342
50% 29 39 253
40% 29 39 279
30% 52 74 191
Entity #2: Chains: B,D,F,H - AGGLUTININ BETA-4 CHAIN protein, length: 21 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 2627
95% 3 3 3274
90% 10 14 670
70% 10 14 728
50% 10 14 817
40% 10 14 835
30% 10 14 840
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.