Sequence Similarity Clusters for the Entities in PDB 4AKB

Entity #1 | Chains: A,C,E,G
AGGLUTININ ALPHA CHAIN protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 8443
95 % 16 26 391
90 % 17 27 393
70 % 18 31 369
50 % 20 41 281
40 % 20 41 299
30 % 37 81 199
Entity #2 | Chains: B,D,F,H
AGGLUTININ BETA-4 CHAIN protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 3065
95 % 2 3 3781
90 % 6 14 845
70 % 6 14 882
50 % 6 14 927
40 % 6 14 948
30 % 6 14 943

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.