Sequence Similarity Clusters for the Entities in PDB 4AKB

Entity #1 | Chains: A,C,E,G
AGGLUTININ ALPHA CHAIN protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 9436
95 % 18 31 351
90 % 19 32 359
70 % 20 36 362
50 % 25 49 259
40 % 25 49 273
30 % 44 91 196
Entity #2 | Chains: B,D,F,H
AGGLUTININ BETA-4 CHAIN protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 3440
95 % 2 3 4219
90 % 6 14 977
70 % 6 14 1014
50 % 6 14 1055
40 % 6 14 1066
30 % 6 14 1040

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.