Sequence Similarity Clusters for the Entities in PDB 4AK4

Entity #1 | Chains: A,C,E,G,I,K,M,O
AGGLUTININ ALPHA CHAIN protein, length: 133 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 8374
95 % 3 26 389
90 % 4 27 390
70 % 4 31 366
50 % 4 41 276
40 % 4 41 297
30 % 15 81 198
Entity #2 | Chains: B,D,F,H,J,L,N,P
AGGLUTININ BETA-4 CHAIN protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 3033
95 % 1 3 3763
90 % 1 14 839
70 % 1 14 878
50 % 1 14 921
40 % 1 14 945
30 % 1 14 938

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.