Sequence Similarity Clusters for the Entities in PDB 4AJY

Entity #1 | Chains: B
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 18 915
95 % 1 20 1171
90 % 1 20 1198
70 % 1 20 1232
50 % 1 20 1287
40 % 1 20 1303
30 % 1 20 1277
Entity #2 | Chains: C
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 47 171
95 % 1 48 230
90 % 1 48 245
70 % 1 48 277
50 % 1 48 312
40 % 1 48 327
30 % 1 49 334
Entity #3 | Chains: H
HYPOXIA-INDUCIBLE FACTOR 1-ALPHA protein, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: V
VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 35 211
95 % 1 35 293
90 % 1 35 303
70 % 1 35 351
50 % 1 35 415
40 % 1 35 441
30 % 1 35 441

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.