Sequence Similarity Clusters for the Entities in PDB 4AJY

Entity #1 | Chains: B
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 18 808
95 % 1 20 1056
90 % 1 20 1078
70 % 1 20 1120
50 % 1 20 1167
40 % 1 20 1185
30 % 1 20 1160
Entity #2 | Chains: C
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 36 208
95 % 1 37 296
90 % 1 37 311
70 % 1 37 332
50 % 1 37 363
40 % 1 37 396
30 % 1 38 395
Entity #3 | Chains: H
HYPOXIA-INDUCIBLE FACTOR 1-ALPHA protein, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: V
VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 24 263
95 % 1 24 385
90 % 1 24 408
70 % 1 24 449
50 % 1 24 516
40 % 1 24 554
30 % 1 24 556

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.