Sequence Similarity Clusters for the Entities in PDB 4AJY

Entity #1 | Chains: B
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 18 789
95 % 1 20 1019
90 % 1 20 1042
70 % 1 20 1087
50 % 1 20 1136
40 % 1 20 1161
30 % 1 20 1134
Entity #2 | Chains: C
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 36 206
95 % 1 37 290
90 % 1 37 304
70 % 1 37 325
50 % 1 37 348
40 % 1 37 380
30 % 1 38 381
Entity #3 | Chains: H
HYPOXIA-INDUCIBLE FACTOR 1-ALPHA protein, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: V
VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 24 261
95 % 1 24 376
90 % 1 24 399
70 % 1 24 430
50 % 1 24 498
40 % 1 24 533
30 % 1 24 537

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.