POP-OUT | CLOSE
 
von Hippel-Lindau protein-ElonginB-ElonginC complex, bound to Hif1- alpha peptide
Sequence Clustering and Redundancy Reduction Results
4AJY
Sequence Clusters for the Sequence Entities in PDB 4AJY
Entity #1: Chains: B - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 118 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 17 597
95% 1 19 802
90% 1 19 827
70% 1 19 865
50% 1 19 922
40% 1 19 950
30% 1 19 931
Entity #2: Chains: C - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 97 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 23 335
95% 1 24 460
90% 1 24 482
70% 1 24 515
50% 1 24 562
40% 1 24 592
30% 1 25 580
Entity #3: Chains: H - HYPOXIA-INDUCIBLE FACTOR 1-ALPHA protein, length: 19 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: V - VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR protein, length: 163 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 14 495
95% 1 14 730
90% 1 14 757
70% 1 14 796
50% 1 14 845
40% 1 14 868
30% 1 14 857
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.