Sequence Similarity Clusters for the Entities in PDB 4AJY

Entity #1 | Chains: B
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 18 798
95 % 1 20 1024
90 % 1 20 1048
70 % 1 20 1093
50 % 1 20 1141
40 % 1 20 1165
30 % 1 20 1139
Entity #2 | Chains: C
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 36 206
95 % 1 37 290
90 % 1 37 304
70 % 1 37 326
50 % 1 37 350
40 % 1 37 383
30 % 1 38 384
Entity #3 | Chains: H
HYPOXIA-INDUCIBLE FACTOR 1-ALPHA protein, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: V
VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 24 262
95 % 1 24 381
90 % 1 24 404
70 % 1 24 438
50 % 1 24 507
40 % 1 24 543
30 % 1 24 548

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.