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von Hippel-Lindau protein-ElonginB-ElonginC complex, bound to Hif1- alpha peptide
Sequence Clustering and Redundancy Reduction Results
4AJY
Sequence Clusters for the Sequence Entities in PDB 4AJY
Entity #1: Chains: B - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 118 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 17 687
95% 1 19 898
90% 1 19 922
70% 1 19 960
50% 1 19 1009
40% 1 19 1040
30% 1 19 1015
Entity #2: Chains: C - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 97 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 34 187
95% 1 35 262
90% 1 35 273
70% 1 35 294
50% 1 35 330
40% 1 35 355
30% 1 36 360
Entity #3: Chains: H - HYPOXIA-INDUCIBLE FACTOR 1-ALPHA protein, length: 19 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #4: Chains: V - VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR protein, length: 163 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 24 237
95% 1 24 333
90% 1 24 353
70% 1 24 378
50% 1 24 415
40% 1 24 444
30% 1 24 457
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.