Sequence Similarity Clusters for the Entities in PDB 4AJ0

Entity #1 | Chains: A,B,C,D
GERMINAL LINE LAMBDA 3 3RCW VARIANT protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24708
95 % 1 2 10185 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 1 3 8264
70 % 2 8 3770
50 % 31 312 23
40 % 114 956 5
30 % 126 1085 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures