Sequence Similarity Clusters for the Entities in PDB 4AIZ

Entity #1 | Chains: A,C,D
V2-17 PROTEIN protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 29592
95 % 1 2 20443 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 2 19875
70 % 3 7 3825
50 % 34 308 21
40 % 120 933 5
30 % 132 1061 7
Entity #2 | Chains: B
V2-17 PROTEIN protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 69250
95 % 2 2 20443 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 2 2 19875
70 % 4 7 3825
50 % 35 308 21
40 % 121 933 5
30 % 133 1061 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures