Sequence Similarity Clusters for the Entities in PDB 4AGI

Entity #1 | Chains: A,B,C,D
FUCOSE-SPECIFIC LECTIN FLEA protein, length: 315 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 19480
95 % 1 11 2521 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 11 2580
70 % 1 14 1388
50 % 1 14 1438
40 % 1 14 1448
30 % 3 18 1259

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures