Sequence Similarity Clusters for the Entities in PDB 4AGI

Entity #1 | Chains: A,B,C,D
FUCOSE-SPECIFIC LECTIN FLEA protein, length: 315 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 19964
95 % 1 11 2585 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 11 2641
70 % 1 14 1416
50 % 1 14 1471
40 % 1 14 1473
30 % 3 18 1288

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures