Sequence Similarity Clusters for the Entities in PDB 4AFY

Entity #1 | Chains: A,B
FIMX protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 12220
95 % 2 4 11752 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.1
PDBFlex
90 % 2 4 11593
70 % 2 4 10950
50 % 2 4 9827
40 % 2 4 8892
30 % 15 33 1175
Entity #2 | Chains: C,D
5'-R(*GP*GP)-3' rna, length: 2 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures