Sequence Similarity Clusters for the Entities in PDB 4AFY

Entity #1 | Chains: A,B
FIMX protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 12154
95 % 2 4 11776 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.1
PDBFlex
90 % 2 4 11614
70 % 2 4 10960
50 % 2 4 9823
40 % 2 4 8934
30 % 11 24 1421
Entity #2 | Chains: C,D
5'-R(*GP*GP)-3' rna, length: 2 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.