Sequence Similarity Clusters for the Entities in PDB 4AFY

Entity #1 | Chains: A,B
FIMX protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 12500
95 % 2 4 11995 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.1
PDBFlex
90 % 2 4 11823
70 % 2 4 11192
50 % 2 4 10041
40 % 2 4 9079
30 % 15 33 1199
Entity #2 | Chains: C,D
5'-R(*GP*GP)-3' rna, length: 2 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures