Sequence Similarity Clusters for the Entities in PDB 4AFX

Entity #1 | Chains: A
PROTEIN Z DEPENDENT PROTEASE INHIBITOR protein, length: 387 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 17085
95 % 1 4 15557 Flexibility: Medium
Max RMSD: 9.3, Avg RMSD: 6.5
PDBFlex
90 % 1 4 15253
70 % 1 5 12316
50 % 1 5 10995
40 % 45 97 354
30 % 60 178 179
Entity #2 | Chains: B
PROTEIN Z DEPENDENT PROTEASE INHIBITOR protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 47600
95 % 1 2 35617 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 34056
70 % 1 2 30384
50 % 2 10 5723
40 % 2 10 5356
30 % 2 10 4827

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.