Sequence Similarity Clusters for the Entities in PDB 4AFX

Entity #1 | Chains: A
PROTEIN Z DEPENDENT PROTEASE INHIBITOR protein, length: 387 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 18048
95 % 1 4 16373 Flexibility: Medium
Max RMSD: 9.3, Avg RMSD: 6.5
PDBFlex
90 % 1 4 16064
70 % 1 5 12975
50 % 1 5 11559
40 % 45 97 400
30 % 60 178 185
Entity #2 | Chains: B
PROTEIN Z DEPENDENT PROTEASE INHIBITOR protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 49864
95 % 1 2 37294 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 35605
70 % 1 2 31652
50 % 2 10 6017
40 % 2 10 5631
30 % 2 10 5062

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures