Sequence Similarity Clusters for the Entities in PDB 4AFX

Entity #1 | Chains: A
PROTEIN Z DEPENDENT PROTEASE INHIBITOR protein, length: 387 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 18468
95 % 1 4 16720 Flexibility: Medium
Max RMSD: 9.3, Avg RMSD: 6.5
PDBFlex
90 % 1 4 16398
70 % 1 5 13229
50 % 1 5 11779
40 % 47 99 411
30 % 62 180 188
Entity #2 | Chains: B
PROTEIN Z DEPENDENT PROTEASE INHIBITOR protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 50786
95 % 1 2 37943 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 36195
70 % 1 2 32157
50 % 2 10 6137
40 % 2 10 5738
30 % 2 10 5165

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures