Sequence Similarity Clusters for the Entities in PDB 4AFK

Entity #1 | Chains: A
ALGINATE PRODUCTION PROTEIN ALGE protein, length: 458 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 5062
95 % 1 8 5376 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 1.1
PDBFlex
90 % 1 8 5413
70 % 1 8 5295
50 % 1 8 5031
40 % 1 8 4721
30 % 1 8 4238

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures