Sequence Similarity Clusters for the Entities in PDB 4AFK

Entity #1 | Chains: A
ALGINATE PRODUCTION PROTEIN ALGE protein, length: 458 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 4249
95 % 1 8 5028 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.0
PDBFlex
90 % 1 8 5048
70 % 1 8 4939
50 % 1 8 4728
40 % 1 8 4489
30 % 1 8 4123

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.