Sequence Similarity Clusters for the Entities in PDB 4AC7

Entity #1 | Chains: A
UREASE SUBUNIT GAMMA protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 7470
95 % 1 13 5213 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 1 13 5232
70 % 1 44 1255
50 % 1 46 1067
40 % 1 46 1074
30 % 1 46 1056
Entity #2 | Chains: B
UREASE SUBUNIT BETA protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 13 4399
95 % 1 13 5192 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 1 13 5214
70 % 1 13 5128
50 % 1 13 4906
40 % 1 13 4647
30 % 1 13 4252
Entity #3 | Chains: C
UREASE SUBUNIT ALPHA protein, length: 570 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 7711
95 % 1 13 4985 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.3
PDBFlex
90 % 1 13 5000
70 % 1 13 4891
50 % 1 49 922
40 % 1 49 948
30 % 1 49 925

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.