Sequence Similarity Clusters for the Entities in PDB 4ABW

Entity #1 | Chains: A,B
TRANSTHYRETIN protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 108 172 46
95 % 170 292 11 Flexibility: Low
Max RMSD: 4.9, Avg RMSD: 0.8
PDBFlex
90 % 170 292 12
70 % 170 298 16
50 % 172 302 21
40 % 172 302 33
30 % 175 314 44

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures