Sequence Similarity Clusters for the Entities in PDB 4AAY

Entity #1 | Chains: A,C,E,G
AROA protein, length: 845 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21116
95 % 1 1 19031 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 18529
70 % 1 1 17055
50 % 1 1 14872
40 % 3 3 5920
30 % 3 3 5203
Entity #2 | Chains: B,D,F,H
AROB protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21117
95 % 1 1 19032 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 1 18530
70 % 1 1 17056
50 % 1 1 14873
40 % 1 1 13242
30 % 1 1 11138

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures