Sequence Similarity Clusters for the Entities in PDB 4AAY

Entity #1 | Chains: A,C,E,G
AROA protein, length: 845 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 16345
95 % 1 1 15275 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 14991
70 % 1 1 14065
50 % 1 1 12486
40 % 3 3 5569
30 % 3 3 5010
Entity #2 | Chains: B,D,F,H
AROB protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22091
95 % 1 1 19099 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 1 18600
70 % 1 1 17168
50 % 1 1 14923
40 % 1 1 13286
30 % 1 1 11378

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.