POP-OUT | CLOSE
 
Symmetrized cryo-EM reconstruction of E. coli DegQ 12-mer in complex with lysozymes
Sequence Clustering and Redundancy Reduction Results
4A8B
Sequence Clusters for the Sequence Entities in PDB 4A8B
Entity #1: Chains: A,B,C,D,E,F,G,H,I,J,K,L - PERIPLASMIC PH-DEPENDENT SERINE ENDOPROTEASE DEGQ protein, length: 436 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 4 367
95% 3 4 526
90% 3 4 549
70% 3 4 588
50% 11 14 339
40% 14 17 305
30% 14 17 326
Entity #2: Chains: M,N,O,P,Q,R - LYSOZYME C protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 431 460 3
95% 479 509 5
90% 494 526 5
70% 704 741 6
50% 712 750 6
40% 746 784 9
30% 746 784 14
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.