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Symmetrized cryo-EM reconstruction of E. coli DegQ 12-mer in complex with lysozymes
Sequence Clustering and Redundancy Reduction Results
4A8B
Sequence Clusters for the Sequence Entities in PDB 4A8B
Entity #1: Chains: A,B,C,D,E,F,G,H,I,J,K,L - PERIPLASMIC PH-DEPENDENT SERINE ENDOPROTEASE DEGQ protein, length: 436 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 4 376
95% 3 4 547
90% 3 4 578
70% 3 4 635
50% 11 14 368
40% 14 17 337
30% 14 17 349
Entity #2: Chains: M,N,O,P,Q,R - LYSOZYME C protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 480 509 3
95% 528 558 4
90% 543 575 5
70% 753 790 6
50% 761 799 6
40% 795 833 10
30% 795 833 16
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.