POP-OUT | CLOSE
 
Asymmetric cryo-EM reconstruction of E. coli DegQ 12-mer in complex with lysozyme
Sequence Clustering and Redundancy Reduction Results
4A8A
Sequence Clusters for the Sequence Entities in PDB 4A8A
Entity #1: Chains: A,B,C,D,E,F,G,H,I,J,K,L - PERIPLASMIC PH-DEPENDENT SERINE ENDOPROTEASE DEGQ protein, length: 436 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 4 370
95% 2 4 529
90% 2 4 553
70% 2 4 593
50% 10 14 346
40% 13 17 316
30% 13 17 336
Entity #2: Chains: M - LYSOZYME C protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 445 475 3
95% 493 524 4
90% 508 541 5
70% 718 756 6
50% 726 765 6
40% 760 799 9
30% 760 799 14
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.