Sequence Similarity Clusters for the Entities in PDB 4A8A

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
PERIPLASMIC PH-DEPENDENT SERINE ENDOPROTEASE DEGQ protein, length: 436 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 4 584
95 % 2 4 797
90 % 2 4 826
70 % 2 4 865
50 % 10 14 496
40 % 14 18 447
30 % 14 18 446
Entity #2 | Chains: M
LYSOZYME C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 610 640 3
95 % 662 693 4
90 % 677 710 5
70 % 889 927 7
50 % 896 935 7
40 % 930 969 11
30 % 930 969 19

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.