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Asymmetric cryo-EM reconstruction of E. coli DegQ 12-mer in complex with lysozyme
Sequence Clustering and Redundancy Reduction Results
4A8A
Sequence Clusters for the Sequence Entities in PDB 4A8A
Entity #1: Chains: A,B,C,D,E,F,G,H,I,J,K,L - PERIPLASMIC PH-DEPENDENT SERINE ENDOPROTEASE DEGQ protein, length: 436 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 4 372
95% 2 4 535
90% 2 4 561
70% 2 4 612
50% 10 14 352
40% 13 17 326
30% 13 17 341
Entity #2: Chains: M - LYSOZYME C protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 460 490 3
95% 508 539 4
90% 523 556 4
70% 733 771 6
50% 741 780 6
40% 775 814 9
30% 775 814 14
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.