Sequence Similarity Clusters for the Entities in PDB 4A5X

Entity #1 | Chains: A,B
MIT DOMAIN-CONTAINING PROTEIN 1 protein, length: 86 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49385
95 % 1 1 36826 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 35135
70 % 1 1 31203
50 % 1 1 26637
40 % 1 1 23491
30 % 1 4 8993
Entity #2 | Chains: C,D
CHARGED MULTIVESICULAR BODY PROTEIN 1A protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures