Sequence Similarity Clusters for the Entities in PDB 486D

Entity #1 | Chains: A
P-SITE TRNA OF 70S RIBOSOME rna, length: 74 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
P-SITE CODON OF 70S RIBOSOME rna, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
A-SITE TRNA OF 70S RIBOSOME rna, length: 72 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: D
A-SITE CODON OF 70S RIBOSOME rna, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #5 | Chains: E
E-SITE TRNA OF 70S RIBOSOME rna, length: 72 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #6 | Chains: F
PENULTIMATE STEM OF 16S RRNA IN THE 70S RIBOSOME rna, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #7 | Chains: G
900 STEM-LOOP OF 16S RRNA IN THE 70S RIBOSOME rna, length: 33 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.