Sequence Similarity Clusters for the Entities in PDB 3ZTD

Entity #1 | Chains: A,D,G,J
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 18 783
95 % 14 20 1006
90 % 14 20 1031
70 % 14 20 1074
50 % 14 20 1126
40 % 14 20 1148
30 % 14 20 1123
Entity #2 | Chains: B,E,H,K
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 36 202
95 % 29 37 286
90 % 29 37 298
70 % 29 37 320
50 % 29 37 342
40 % 29 37 377
30 % 29 38 376
Entity #3 | Chains: C,F,I,L
VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 22 24 261
95 % 22 24 376
90 % 22 24 399
70 % 22 24 427
50 % 22 24 474
40 % 22 24 512
30 % 22 24 518

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.