Sequence Similarity Clusters for the Entities in PDB 3ZTD

Entity #1 | Chains: A,D,G,J
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 18 838
95 % 14 20 1084
90 % 14 20 1106
70 % 14 20 1149
50 % 14 20 1197
40 % 14 20 1211
30 % 14 20 1187
Entity #2 | Chains: B,E,H,K
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 37 208
95 % 30 38 292
90 % 30 38 304
70 % 30 38 331
50 % 30 38 370
40 % 30 38 406
30 % 30 39 399
Entity #3 | Chains: C,F,I,L
VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 25 251
95 % 23 25 370
90 % 23 25 396
70 % 23 25 440
50 % 23 25 512
40 % 23 25 548
30 % 23 25 550

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.