Sequence Similarity Clusters for the Entities in PDB 3ZTD

Entity #1 | Chains: A,D,G,J
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 18 798
95 % 14 20 1024
90 % 14 20 1048
70 % 14 20 1093
50 % 14 20 1141
40 % 14 20 1165
30 % 14 20 1139
Entity #2 | Chains: B,E,H,K
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 36 206
95 % 29 37 290
90 % 29 37 304
70 % 29 37 326
50 % 29 37 350
40 % 29 37 383
30 % 29 38 384
Entity #3 | Chains: C,F,I,L
VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 22 24 262
95 % 22 24 381
90 % 22 24 404
70 % 22 24 438
50 % 22 24 507
40 % 22 24 543
30 % 22 24 548

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.