Sequence Similarity Clusters for the Entities in PDB 3ZTD

Entity #1 | Chains: A,D,G,J
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 18 850
95 % 14 20 1094
90 % 14 20 1118
70 % 14 20 1164
50 % 14 20 1212
40 % 14 20 1228
30 % 14 20 1201
Entity #2 | Chains: B,E,H,K
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 30 37 210
95 % 30 38 295
90 % 30 38 308
70 % 30 38 339
50 % 30 38 398
40 % 30 38 433
30 % 30 39 426
Entity #3 | Chains: C,F,I,L
VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 23 25 257
95 % 23 25 379
90 % 23 25 406
70 % 23 25 449
50 % 23 25 523
40 % 23 25 560
30 % 23 25 560

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.