Sequence Similarity Clusters for the Entities in PDB 3ZTD

Entity #1 | Chains: A,D,G,J
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 18 885
95 % 14 20 1128
90 % 14 20 1155
70 % 14 20 1198
50 % 14 20 1248
40 % 14 20 1263
30 % 14 20 1240
Entity #2 | Chains: B,E,H,K
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 31 38 219
95 % 31 39 298
90 % 31 39 313
70 % 31 39 351
50 % 31 39 411
40 % 31 39 446
30 % 31 40 441
Entity #3 | Chains: C,F,I,L
VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 26 269
95 % 24 26 385
90 % 24 26 416
70 % 24 26 457
50 % 24 26 532
40 % 24 26 573
30 % 24 26 567

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.