Sequence Similarity Clusters for the Entities in PDB 3ZTC

Entity #1 | Chains: A,D,G,J
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 18 810
95 % 12 20 1058
90 % 12 20 1080
70 % 12 20 1124
50 % 12 20 1174
40 % 12 20 1192
30 % 12 20 1165
Entity #2 | Chains: B,E,H,K
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 36 208
95 % 28 37 296
90 % 28 37 311
70 % 28 37 333
50 % 28 37 365
40 % 28 37 399
30 % 28 38 397
Entity #3 | Chains: C,F,I,L
VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 20 24 265
95 % 20 24 390
90 % 20 24 410
70 % 20 24 450
50 % 20 24 517
40 % 20 24 556
30 % 20 24 560

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.