Sequence Similarity Clusters for the Entities in PDB 3ZO0

Entity #1 | Chains: A
IG GAMMA-2A CHAIN C REGION, A ALLELE protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 81336
95 % 2 2 28194 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.3
PDBFlex
90 % 2 2 27215
70 % 2 7 7240
50 % 22 198 136
40 % 22 198 154
30 % 23 201 155
Entity #2 | Chains: B
E3 UBIQUITIN-PROTEIN LIGASE TRIM21 protein, length: 182 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 81337
95 % 2 2 28195 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 2 2 27216
70 % 2 3 15456
50 % 2 3 13932
40 % 3 4 11446
30 % 4 5 9108

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures