Sequence Similarity Clusters for the Entities in PDB 3ZKJ

Entity #1 | Chains: A,D
ANKYRIN REPEAT AND SOCS BOX PROTEIN 9 protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 17401
95 % 1 2 15459
90 % 1 2 15150
70 % 1 2 14153
50 % 1 2 12443
40 % 1 2 11174
30 % 1 2 9622
Entity #2 | Chains: B,E
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 25 36 206
95 % 25 37 290
90 % 25 37 304
70 % 25 37 326
50 % 25 37 350
40 % 25 37 382
30 % 25 38 385
Entity #3 | Chains: C,F
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 18 799
95 % 10 20 1028
90 % 10 20 1051
70 % 10 20 1095
50 % 10 20 1144
40 % 10 20 1165
30 % 10 20 1140

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.