Sequence Similarity Clusters for the Entities in PDB 3ZKJ

Entity #1 | Chains: A,D
ANKYRIN REPEAT AND SOCS BOX PROTEIN 9 protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 17099
95 % 1 2 15188
90 % 1 2 14890
70 % 1 2 13903
50 % 1 2 12232
40 % 1 2 11000
30 % 1 2 9490
Entity #2 | Chains: B,E
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 protein, length: 96 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 25 36 202
95 % 25 37 286
90 % 25 37 298
70 % 25 37 320
50 % 25 37 342
40 % 25 37 377
30 % 25 38 376
Entity #3 | Chains: C,F
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 protein, length: 118 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 18 782
95 % 10 20 1005
90 % 10 20 1030
70 % 10 20 1073
50 % 10 20 1125
40 % 10 20 1148
30 % 10 20 1122

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.