Sequence Similarity Clusters for the Entities in PDB 3ZIA

Entity #1 | Chains: A,B,C,K,L,M
ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 10 645
95 % 1 12 600 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 1 12 627
70 % 11 59 166
50 % 12 71 166
40 % 12 71 182
30 % 12 71 197
Entity #2 | Chains: D,E,F,N,O,P
ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL protein, length: 478 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 11 523
95 % 1 12 601 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.0
PDBFlex
90 % 1 15 528
70 % 12 72 138
50 % 12 72 167
40 % 12 72 183
30 % 12 72 198
Entity #3 | Chains: G,Q
ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 2222
95 % 1 10 2438 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.2
PDBFlex
90 % 1 10 2495
70 % 1 10 2486
50 % 1 15 1989
40 % 10 65 622
30 % 10 65 615
Entity #4 | Chains: H,R
ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 10 2041
95 % 1 10 2636 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 1.8
PDBFlex
90 % 1 10 2684
70 % 1 10 2661
50 % 1 13 2273
40 % 1 13 2256
30 % 6 29 1288
Entity #5 | Chains: I,S
ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 2172
95 % 1 11 2559 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 1.7
PDBFlex
90 % 1 11 2608
70 % 1 11 2592
50 % 1 11 2560
40 % 1 11 2511
30 % 1 11 2378
Entity #6 | Chains: J,T
ATPASE INHIBITOR, MITOCHONDRIAL protein, length: 63 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 47583
95 % 1 1 35554 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 33988
70 % 1 1 30309
50 % 1 1 25955
40 % 1 1 22915
30 % 1 1 19437

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.