Sequence Similarity Clusters for the Entities in PDB 3ZIA

Entity #1 | Chains: A,B,C,K,L,M
ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 10 629
95 % 1 12 573 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 1 12 602
70 % 11 59 166
50 % 12 71 164
40 % 12 71 179
30 % 12 71 193
Entity #2 | Chains: D,E,F,N,O,P
ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL protein, length: 478 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 11 497
95 % 1 12 574 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.1
PDBFlex
90 % 1 15 506
70 % 12 72 137
50 % 12 72 165
40 % 12 72 180
30 % 12 72 194
Entity #3 | Chains: G,Q
ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 2177
95 % 1 10 2386 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.3
PDBFlex
90 % 1 10 2447
70 % 1 10 2434
50 % 1 15 1955
40 % 10 65 612
30 % 10 65 609
Entity #4 | Chains: H,R
ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 10 1988
95 % 1 10 2588 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.6
PDBFlex
90 % 1 10 2639
70 % 1 10 2612
50 % 1 13 2221
40 % 1 13 2216
30 % 6 29 1271
Entity #5 | Chains: I,S
ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 2128
95 % 1 11 2508 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.6
PDBFlex
90 % 1 11 2559
70 % 1 11 2538
50 % 1 11 2505
40 % 1 11 2468
30 % 1 11 2333
Entity #6 | Chains: J,T
ATPASE INHIBITOR, MITOCHONDRIAL protein, length: 63 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46921
95 % 1 1 35067 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 33537
70 % 1 1 29903
50 % 1 1 25616
40 % 1 1 22622
30 % 1 1 19181

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.