POP-OUT | CLOSE
 
The structure of F1-ATPase from Saccharomyces cerevisiae inhibited by its regulatory protein IF1
Sequence Clustering and Redundancy Reduction Results
3ZIA
Sequence Clusters for the Sequence Entities in PDB 3ZIA
Entity #1: Chains: A,B,C,K,L,M - ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL protein, length: 510 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 10 391
95% 1 12 380
90% 1 12 402
70% 10 44 110
50% 11 50 132
40% 11 50 161
30% 11 50 185
Entity #2: Chains: D,E,F,N,O,P - ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL protein, length: 478 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 11 330
95% 1 12 381
90% 1 12 403
70% 11 51 99
50% 11 51 133
40% 11 51 162
30% 11 51 186
Entity #3: Chains: G,Q - ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL protein, length: 278 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 9 1508
95% 1 10 1716
90% 1 10 1754
70% 1 10 1777
50% 1 10 1838
40% 10 43 648
30% 10 45 598
Entity #4: Chains: H,R - ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL protein, length: 138 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 10 1377
95% 1 10 1857
90% 1 10 1890
70% 1 10 1916
50% 1 10 1967
40% 1 10 1994
30% 6 18 1331
Entity #5: Chains: I,S - ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL protein, length: 61 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 9 1473
95% 1 11 1807
90% 1 11 1840
70% 1 11 1864
50% 1 11 1920
40% 1 11 1931
30% 1 11 1846
Entity #6: Chains: J,T - ATPASE INHIBITOR, MITOCHONDRIAL protein, length: 63 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 36367
95% 1 1 27427
90% 1 1 26387
70% 1 1 23804
50% 1 1 20609
40% 1 1 18298
30% 1 1 15585
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.