Sequence Similarity Clusters for the Entities in PDB 3ZIA

Entity #1 | Chains: A,B,C,K,L,M
ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 11 586
95 % 1 13 571 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.9
PDBFlex
90 % 1 13 601
70 % 11 60 169
50 % 12 72 172
40 % 12 72 186
30 % 12 72 199
Entity #2 | Chains: D,E,F,N,O,P
ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL protein, length: 478 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 12 475
95 % 1 13 572 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.0
PDBFlex
90 % 1 16 522
70 % 12 73 142
50 % 12 74 167
40 % 12 74 182
30 % 12 74 195
Entity #3 | Chains: G,Q
ATP SYNTHASE SUBUNIT GAMMA, MITOCHONDRIAL protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 10 2151
95 % 1 11 2317 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.3
PDBFlex
90 % 1 11 2381
70 % 1 11 2385
50 % 1 16 1925
40 % 10 66 636
30 % 10 66 618
Entity #4 | Chains: H,R
ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIAL protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 11 1857
95 % 1 11 2427 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 1.8
PDBFlex
90 % 1 11 2493
70 % 1 11 2488
50 % 1 14 2206
40 % 1 14 2196
30 % 6 30 1283
Entity #5 | Chains: I,S
ATP SYNTHASE SUBUNIT EPSILON, MITOCHONDRIAL protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 2305
95 % 1 12 2360 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.6
PDBFlex
90 % 1 12 2427
70 % 1 12 2433
50 % 1 12 2410
40 % 1 12 2386
30 % 1 12 2272
Entity #6 | Chains: J,T
ATPASE INHIBITOR, MITOCHONDRIAL protein, length: 63 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49618
95 % 1 1 37023 Flexibility: No
Max RMSD: 0.0, Avg RMSD: 0.0
PDBFlex
90 % 1 1 35339
70 % 1 1 31397
50 % 1 1 26819
40 % 1 1 23671
30 % 1 1 20074

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures