Sequence Similarity Clusters for the Entities in PDB 3ZHP

Entity #1 | Chains: A,B
CALCIUM-BINDING PROTEIN 39-LIKE protein, length: 340 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35387
95 % 1 1 28067 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 27099
70 % 5 11 2957
50 % 5 11 2915
40 % 5 11 2870
30 % 5 11 2677
Entity #2 | Chains: C,D
SERINE/THREONINE-PROTEIN KINASE 24 protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37017
95 % 27 28 1722 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 1.4
PDBFlex
90 % 27 28 1762
70 % 29 34 1411
50 % 32 37 1157
40 % 126 134 228
30 % 3606 3912 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures