Sequence Similarity Clusters for the Entities in PDB 3ZHP

Entity #1 | Chains: A,B
CALCIUM-BINDING PROTEIN 39-LIKE protein, length: 340 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36603
95 % 1 1 31174 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 29871
70 % 5 11 3028
50 % 5 11 2982
40 % 5 11 2904
30 % 5 11 2687
Entity #2 | Chains: C,D
SERINE/THREONINE-PROTEIN KINASE 24 protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 36604
95 % 27 28 1801 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 1.4
PDBFlex
90 % 27 28 1842
70 % 29 34 1468
50 % 32 37 1218
40 % 133 143 232
30 % 3957 4300 2

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures