Sequence Similarity Clusters for the Entities in PDB 3ZHE

Entity #1 | Chains: A,C
NONSENSE-MEDIATED MRNA DECAY PROTEIN protein, length: 420 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 31917
95 % 1 1 25719 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 1 24877
70 % 1 1 22676
50 % 1 1 19601
40 % 1 1 17418
30 % 1 1 14918
Entity #2 | Chains: B,D
PROTEIN SMG-7 protein, length: 395 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32432
95 % 1 1 26020 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 25163
70 % 1 1 22912
50 % 1 1 19767
40 % 1 1 17553
30 % 1 1 15022

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.