Sequence Similarity Clusters for the Entities in PDB 3ZHE

Entity #1 | Chains: A,C
NONSENSE-MEDIATED MRNA DECAY PROTEIN protein, length: 420 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 32958
95 % 1 1 26559
90 % 1 1 25666
70 % 1 1 23295
50 % 1 1 20097
40 % 1 1 17862
30 % 1 1 15305
Entity #2 | Chains: B,D
PROTEIN SMG-7 protein, length: 395 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 33486
95 % 1 1 26864 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 25956
70 % 1 1 23537
50 % 1 1 20268
40 % 1 1 18000
30 % 1 1 15411

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.