Sequence Similarity Clusters for the Entities in PDB 3ZHE

Entity #1 | Chains: A,C
NONSENSE-MEDIATED MRNA DECAY PROTEIN protein, length: 420 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34410
95 % 1 1 27657 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 1 26705
70 % 1 1 24184
50 % 1 1 20830
40 % 1 1 18499
30 % 1 1 15842
Entity #2 | Chains: B,D
PROTEIN SMG-7 protein, length: 395 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34963
95 % 1 1 27972 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 1 27004
70 % 1 1 24432
50 % 1 1 21004
40 % 1 1 18641
30 % 1 1 15952

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures