Sequence Similarity Clusters for the Entities in PDB 3ZH2

Entity #1 | Chains: A,B,C,D
L-LACTATE DEHYDROGENASE protein, length: 316 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 14 2403
95 % 18 19 2298 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.7
PDBFlex
90 % 23 25 1247
70 % 23 25 1282
50 % 53 69 267
40 % 94 160 66
30 % 129 220 40
Entity #2 | Chains: E,G
DNA APTAMER dna, length: 35 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.