Sequence Similarity Clusters for the Entities in PDB 3ZH2

Entity #1 | Chains: A,B,C,D
L-LACTATE DEHYDROGENASE protein, length: 316 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 14 2373
95 % 18 19 2271 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.7
PDBFlex
90 % 23 25 1234
70 % 23 25 1270
50 % 53 69 268
40 % 94 160 65
30 % 129 220 39
Entity #2 | Chains: E,G
DNA APTAMER dna, length: 35 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.