Sequence Similarity Clusters for the Entities in PDB 3ZH2

Entity #1 | Chains: A,B,C,D
L-LACTATE DEHYDROGENASE protein, length: 316 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 15 16 2725
95 % 18 19 2542 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.7
PDBFlex
90 % 23 25 1394
70 % 23 25 1409
50 % 53 70 261
40 % 100 167 79
30 % 140 232 45
Entity #2 | Chains: E,G
DNA APTAMER dna, length: 35 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures