Sequence Similarity Clusters for the Entities in PDB 3ZFF

Entity #1 | Chains: A
VP1 protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 9807
95 % 16 25 1219
90 % 16 26 1093
70 % 21 33 987
50 % 21 33 1033
40 % 69 148 283
30 % 69 148 287
Entity #2 | Chains: B
VP2 protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 9895
95 % 14 23 2547
90 % 14 23 2596
70 % 17 29 1940
50 % 64 150 302
40 % 64 150 318
30 % 80 178 170
Entity #3 | Chains: C
VP3 protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 9922
95 % 16 30 986
90 % 16 30 1011
70 % 21 37 911
50 % 27 43 869
40 % 69 159 263
30 % 86 189 154
Entity #4 | Chains: D
VP4 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 12 5213
95 % 10 12 5835
90 % 10 12 5830
70 % 12 14 4587
50 % 57 116 431
40 % 57 116 470
30 % 57 116 460

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.