Sequence Similarity Clusters for the Entities in PDB 3ZFF

Entity #1 | Chains: A
VP1 protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 9093
95 % 16 25 1143
90 % 16 26 1012
70 % 21 32 917
50 % 21 32 963
40 % 69 146 260
30 % 69 146 272
Entity #2 | Chains: B
VP2 protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 9184
95 % 14 23 2313
90 % 14 23 2351
70 % 17 29 1774
50 % 64 145 279
40 % 64 145 297
30 % 80 173 161
Entity #3 | Chains: C
VP3 protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 9208
95 % 16 30 894
90 % 16 30 920
70 % 21 36 842
50 % 27 42 783
40 % 69 153 246
30 % 85 181 146
Entity #4 | Chains: D
VP4 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 12 4842
95 % 10 12 5437
90 % 10 12 5437
70 % 12 14 4290
50 % 57 115 360
40 % 57 115 393
30 % 57 115 396

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.