Sequence Similarity Clusters for the Entities in PDB 3ZFF

Entity #1 | Chains: A
VP1 protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 9172
95 % 16 25 1147
90 % 16 26 1023
70 % 21 32 924
50 % 21 32 973
40 % 69 147 262
30 % 69 147 271
Entity #2 | Chains: B
VP2 protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 9263
95 % 14 23 2328
90 % 14 23 2369
70 % 17 29 1785
50 % 64 146 281
40 % 64 146 299
30 % 80 174 160
Entity #3 | Chains: C
VP3 protein, length: 242 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 7 9287
95 % 16 30 896
90 % 16 30 924
70 % 21 36 858
50 % 27 42 795
40 % 69 154 247
30 % 85 183 146
Entity #4 | Chains: D
VP4 protein, length: 69 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 10 12 4878
95 % 10 12 5483
90 % 10 12 5486
70 % 12 14 4335
50 % 57 116 359
40 % 57 116 394
30 % 57 116 394

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.